rOpenSci | Blog

All posts (Page 36 of 90)

Spelling 2.0: Improved Markdown and RStudio Support

We have released updates for the rOpenSci text analysis tools. This technote will highlight some of the major improvements in the spelling package and also the underlying hunspell package, which provides the spelling engine for the spelling package. install.packages("spelling") Update to the latest versions to use these cool new features! Upcoming version of #rstats spelling package will also check your package readme and news files. pic.twitter.com/bem8rGx9e3 — Jeroen Ooms (@opencpu) December 17, 2018 🔗 Automatic Checking of README and NEWS files Users that are already using spelling on their packages might discover a few new typos!...

rcites - The story behind the package

🔗 The Ecology Hackathon Almost one year ago now, ecologists filled a room for the “Ecology Hackathon: Developing R Packages for Accessing, Synthesizing and Analyzing Ecological Data” that was co-organised by rOpenSci Fellow, Nick Golding and Methods in Ecology and Evolution. This hackathon was part of the “Ecology Across Borders” Joint Annual Meeting 2017 of BES, GfÖ, NecoV, and EEF in Ghent. At different tables, different people joined each other to work on different ideas to implement as R packages....

Pdftools 2.0: powerful pdf text extraction tools

A new version of pdftools has been released to CRAN. Go get it while it’s hot: install.packages("pdftools") This version has two major improvements: low level text extraction and encoding improvements. 🔗 About PDF textboxes A pdf document may seem to contain paragraphs or tables in a viewer, but this is not actually true. PDF is a printing format: a page consists of a series of unrelated lines, bitmaps, and textboxes with a given size, position and content....

Generating reasonable starting trees for complex phylogenetic analyses

I never really thought I would write an R package. I use R pretty casually. Then, this year, I was invited to participate during the last week of the Analytical Paleobiology short course, an intensive month-long experience in quantitative paleontology. I was thrilled to be invited. But I got a slight sinking feeling in my stomach when I realized all the materials were in R. And so I, a Pythonista, decided I would spend some of my maternity leave writing R packages to try to blend in with students who had spent the month living and breathing R....

Community Call - Governance strategies for open source research software projects

🎤 Dan Sholler, rOpenSci Postdoctoral Fellow 🕘 Tuesday, December 18, 2018, 10-11AM PST; 7-8PM CET (find your timezone) ☎️ Details for joining the Community Call. Everyone is welcome. No RSVP needed. Researchers use open source software for the capabilities it provides, such as streamlined data access and analysis and interoperability with other pieces of the scientific computing ecosystem. For most complex software, generating these technical capabilities requires building and governing a community via sound management practices, activities that are often less visible than code contributions and other software development work....

Working together to push science forward

Happy rOpenSci users can be found at